Soma

Spine

Neurite

Synapse

Multispectral tracing in densely labeled mouse brain with nTracer.

Roossien DH, Sadis BV*, Yan Y*, Webb JM*, Min LY, Dizaji AS, Bogart LJ, Mazuski C, Huth RS, Stecher JS, Akula S, Shen F, Xiao T, Vandenbrink M, Lichtman JW, Hensch TK, Herzog ED, Cai D    Bioinformatics 2019;btz084    PDF    Supplemental

The distribution of Brainbow and nTracer is partially supported by an NSF grant. Please register as a user and acknowledge "NSF-1707316 Neunex MINT" in your future publications that use Brainbow and nTracer.

March 12, 2020: nTracer1.3.5

- Buffered virtual stack implementation (allows 200Gb image to be opened on <8Gb of memory)
- Support for ROI manager in nTracer views
- Backend performance improvements in trace rendering and maximum projection (traces load x10 faster)
- Support for visualization of imported ROIs 

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Sample Image

Sample Tracing Results

<imagescience.jar> is required for <AlignMaster>. Download from HERE if it is not in "ImageJ/jars" folder